Effect of Genetic Polymorphism (rs2619363) on SNCA Gene among Iraqi Patients with Parkinson’s and some Gastrointestinal Disorders

Abstract

Parkinson’s disease (PD) consider as a progressive ageing neurodegenerative disease, Parkinson’s consider as a heterogenous disease, with mainly initiate through correlation between genetic and epigenetic by inducing  of  different  factors on some related genes, these factors like (environmental, toxicants, nutrition, heavy metals, pesticides, some drugs) and also(trauma on head ,strokes) in addition to unknown reasons which cause an idiopathic PD .Current study aims to focusing on specific related PD  gene called SNCA  by single nucleotides  polymorphism (rs2619363)  as a risk factor for PD initiation disease in PD patients in addition to study the effect of polymorphisms on random Iraqi patients with different gastrointestinal   tract disorders to proof the previous hypophysis that suggested about PD initiation which may started from gastrointestinal tract disorders . The chosen samples belong to participants suffering with PD in addition to others suffering with different gastrointestinal tract disorders (GITD) in addition to healthy people. In current study; number of participants were 133 collected in period (March-2022 to November- 2022) from participants whom attended to Al-yarmouk teaching hospital and Baghdad hospital in medical city), and mainly divided to (48 patient with PD, 49 patient with GITD and 36 healthy participants), the blood samples were kept in EDTA tubes for molecular tests, DNA was extracted from the blood samples and then used real-time polymerase chain reaction (PCR) technique with complementary primer, then used singer sequencing to analysis the data. The results revealed the genotypes of all participants, a wild type in PD was (CC) more OR with (1.40) than (CA) with (0.76) and (AA) as mutant with (0.73), respectively, while in GITD (CC) also more genotype appeared with OR (1.00), but (CA) more than (AA) with OR (1.10 and 0.72, respectively). In PD and GITD (C allele) frequency more in all patients, while A allele more frequency in healthy. In conclusion polymorphism of study target SNP on SNCA gene not revealed significance on both PD and GITD because of, the nature of Iraqi population samples in addition to small samples not give the real reflect or influence of this alternation on SNCA gene as a risk factor on Iraqi population than other communities and populations.